SRR6576995_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576995_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	871927
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4228	0.4849029792631723	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2864	0.32846786485565876	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2527	0.2898178402549755	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1465	0.16801865293768858	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1461	0.16755989893649353	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1154	0.13235052934477315	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1106	0.12684548133043247	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	882	0.10115525726350945	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1575	54.094322	1
TCAACGC	1740	47.802963	4
ATCAACG	1785	46.334583	3
CAACGCA	1835	45.328156	5
AACGCAG	1935	43.471325	6
TATCAAC	2095	39.927013	2
GGTATCA	345	38.20257	1
GTACATG	3275	35.788353	1
TACATGG	3320	35.103012	2
GTCTTAG	885	34.57194	1
TTAGGTA	780	34.340855	4
TAGGTAT	780	34.340855	5
CGCAGAG	2445	33.846497	8
ACGCAGA	2475	33.417065	7
ACATGGG	3480	33.354046	3
GGTATAG	830	32.838303	7
CTTAGGT	830	32.272125	3
AGGTATA	845	31.69925	6
ACCTAAG	1435	31.490026	1
GTATAGT	960	30.856684	8