SRR6576995_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576995_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	871927
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4234	0.4855911102649648	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2875	0.3297294383589452	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2551	0.29257036426214583	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1604	0.18396035447921674	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1530	0.1754734054571082	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1211	0.13888777386180265	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1169	0.1340708568492546	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1037	0.11893197480981779	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	886	0.10161401126470448	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	375	0.0	53.90277	1
GTATCAA	1640	0.0	50.447857	1
TCAACGC	1905	0.0	42.42366	4
ATCAACG	1935	0.0	41.765923	3
CAACGCA	1960	0.0	41.2332	5
CTTAGGT	770	0.0	39.66407	3
TTAGGTA	810	0.0	39.4456	4
AACGCAG	2070	0.0	39.26905	6
TAGGTAT	810	0.0	38.865517	5
AGGTATA	800	0.0	38.764	6
TATCAAC	2155	0.0	37.735302	2
CCTAACG	75	7.4355194E-6	37.604427	2
GTCTTAG	915	0.0	37.503834	1
GGTATAG	940	0.0	33.490494	7
GTTATAC	85	1.7521961E-5	33.18228	1
GTACATG	3465	0.0	32.966812	1
TATAGTA	1075	0.0	32.781395	9
TACATGG	3510	0.0	32.274456	2
GGTAATC	325	0.0	31.80636	8
ACATGGG	3580	0.0	31.499441	3