SRR6576987_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576987_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	590221
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2466	0.4178096001328316	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1591	0.269560046152204	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1457	0.24685668588545645	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	968	0.16400636371799715	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	795	0.13469530904525592	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	712	0.12063277992480782	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	657	0.1113142365317398	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	649	0.10995881203820265	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	630	0.10673967886605186	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	300	0.0	58.14148	1
GTATCAA	1320	0.0	57.141502	1
TCAACGC	1610	0.0	46.126133	4
ATCAACG	1655	0.0	44.871952	3
CAACGCA	1685	0.0	44.35199	5
AACGCAG	1715	0.0	43.850216	6
TATCAAC	1880	0.0	39.501637	2
GTACATG	2600	0.0	37.16945	1
TACATGG	2605	0.0	37.16853	2
ACGCAGA	2090	0.0	35.979305	7
ACATGGG	2685	0.0	35.886032	3
GTATTCG	40	1.1590188E-5	35.248478	18-19
CGCAGAG	2180	0.0	34.062748	8
GCAGAGT	2280	0.0	32.774895	9
CATGGGG	1655	0.0	32.091965	4
CTTAGGT	490	0.0	31.654371	3
AGGTATA	505	0.0	31.644876	6
CCTATAG	105	2.0624466E-6	31.334633	3
TATTCGA	45	2.5947507E-5	31.331976	20-21
GGTATAG	505	0.0	30.71154	7