SRR6576961_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576961_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1185873
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4101	0.34582117983966243	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2554	0.21536876208497874	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2278	0.19209476900140235	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1639	0.13821041544920915	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1372	0.11569535692270588	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1372	0.11569535692270588	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1336	0.11265961869441332	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1253	0.10566055555696098	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1224	0.10321509976194752	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	630	59.686264	1
GTATCAA	2495	57.45849	1
ATCAACG	3030	46.068295	3
TCAACGC	3035	45.837543	4
CAACGCA	3165	44.1033	5
AACGCAG	3265	42.752506	6
TTAGGTA	835	38.27461	4
TATCAAC	3685	38.265617	2
CTTAGGT	880	36.851467	3
TAGGTAT	890	35.909325	5
GTCTTAG	960	35.252197	1
ACGCAGA	4095	33.972393	7
TCTTAGG	1140	33.809124	2
AGGTATA	935	33.678406	6
CGCAGAG	4295	32.28101	8
GGTATAG	1020	30.87187	7
TTAAGAC	320	30.843071	3
TATAGTA	1120	30.633255	9
GTATAGT	1150	30.242815	8
GTACATG	5040	30.216171	1