SRR6576954_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576954_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1005232
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3682	0.366283604182915	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1975	0.19647205819154187	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1591	0.15827192130771803	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1318	0.13111401149187452	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1186	0.11798271443806006	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1083	0.10773632355515941	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1051	0.10455297881484076	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1037	0.10316026549095135	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	685	59.009735	1
GTATCAA	2180	54.979336	1
TCAACGC	2625	44.938335	4
ATCAACG	2735	43.130947	3
CAACGCA	2765	43.002922	5
AACGCAG	2815	42.2391	6
TATCAAC	3050	39.296703	2
ACGCAGA	3530	33.68359	7
CGCAGAG	3665	32.571095	8
GTACATG	4705	32.366905	1
TAGGTAT	670	32.26678	5
ACCTAAG	1130	32.027874	1
TACATGG	4660	31.368246	2
CTAAGAC	1220	31.203102	3
GCAGAGT	3990	29.918058	9
TAAGACA	1465	29.51364	4
ACATGGG	4960	29.46804	3
CTTAGGT	740	28.579416	3
TTAGGTA	790	28.555302	4
CCTAAGA	1360	28.339407	2