SRR6576924_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576924_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48308
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	126	0.2608263641632856	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	66	0.13662333360934006	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53	0.10971267698931854	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	50	0.10350252546162127	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACATG	540	0.0	61.921772	1
ACATGGG	565	0.0	59.891167	3
TACATGG	560	0.0	59.710285	2
CATGGGA	320	0.0	58.74741	4
CTATTGG	25	0.00516412	56.51452	1
CATGGGG	200	0.0	56.397514	4
ACGCTGA	25	0.0052067186	56.397514	6
GTATCAA	160	0.0	55.92583	1
ATGGGAG	150	0.0	53.26432	5
ATGGGGC	55	8.637726E-7	51.27047	5
ATGGGGG	95	7.2759576E-12	49.471504	5
TGGGAGA	105	0.0	49.235928	6
ATGGGAC	55	5.2093645E-5	42.72539	5
ATGGGAT	95	2.046545E-8	39.577206	5
ATGGGGA	60	8.7013905E-5	39.164944	5
ATCAACG	235	0.0	37.998325	3
AACGCAG	235	0.0	37.998325	6
GGGAGAA	50	0.0016863021	37.598343	7
TGGGGGG	75	7.2990133E-6	37.598343	6
ATGGGAA	140	1.2732926E-11	36.926945	5