SRR6576893_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576893_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1069867
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4123	0.3853750045566412	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2776	0.25947150440194905	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2130	0.1990901672824753	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1352	0.12637084796521436	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1283	0.11992144818000741	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1281	0.11973450905579852	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1239	0.1158087874474117	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1149	0.10739652685801133	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1104	0.10319039656331115	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1078	0.10076018794859548	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	585	60.351036	1
GTATCAA	2205	52.731205	1
TCAACGC	2520	45.127625	4
ATCAACG	2540	44.77229	3
CAACGCA	2570	44.43251	5
AACGCAG	2695	42.37163	6
TATCAAC	3100	36.84115	2
TAGGTAT	880	33.108288	5
CTTAGGT	885	32.921234	3
ACGCAGA	3495	32.672832	7
CGCAGAG	3510	32.556026	8
ACCTAAG	1375	31.839008	1
TTAGGTA	915	30.814692	4
AGGTATA	920	30.64722	6
GTCTTAG	990	29.95606	1
GCAGAGT	3910	29.225485	9
GGTAATC	355	29.142485	8
CTAAGAC	1560	28.918402	3
GGTATAG	1000	28.665369	7
TCTTAGG	1100	28.199398	2