SRR6576893_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576893_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1069867
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4012	0.3749998831630474	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2943	0.27508092127339195	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2102	0.19647301954355073	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1518	0.1418867952745528	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1318	0.12319288285366312	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1307	0.12216471767051418	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1306	0.12207124810840973	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1143	0.10683570948538464	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1106	0.10337733568752004	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1101	0.10290998787699779	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	545	62.091095	1
GTATCAA	2305	55.257553	1
TCAACGC	2660	46.80969	4
ATCAACG	2695	46.201775	3
CAACGCA	2825	44.075672	5
AACGCAG	2930	42.656532	6
TATCAAC	3260	38.49346	2
ACGCAGA	3635	34.254135	7
CGCAGAG	3730	33.38171	8
TAGGTAT	785	31.723255	5
GGTAATC	330	31.32422	8
GCAGAGT	4100	30.369211	9
CTTAGGT	775	30.31376	3
TTAGGTA	850	29.297358	4
GGGTATA	380	28.44707	1
GTGCAAG	635	28.12569	1
GTCTTAG	870	28.091661	1
GTACATG	4455	28.06256	1
AGGTATA	855	28.026934	6
TACATGG	4470	27.547812	2