SRR6576888_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576888_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1295215
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4441	0.34287743733665843	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2925	0.225831232652494	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2120	0.1636793891361666	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1614	0.12461251606876078	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1465	0.11310863447381322	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1353	0.10446142146284594	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1328	0.1025312399871836	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1309	0.1010643020656802	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1301	0.10044664399346827	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	770	66.02579	1
GTATCAA	2670	51.128998	1
TCAACGC	3100	43.507328	4
CAACGCA	3160	42.68124	5
ATCAACG	3180	42.412804	3
AACGCAG	3320	40.907406	6
TATCAAC	3605	38.328144	2
CTTAGGT	865	37.486526	3
TAGGTAT	860	36.611588	5
TTAGGTA	865	36.399963	4
GTCTTAG	985	36.32101	1
AGGTATA	900	34.46225	6
GGTATAG	970	33.428703	7
ACGCAGA	4170	32.56897	7
GTATAGT	1090	31.926353	8
CGCAGAG	4360	31.279198	8
TCTTAGG	1195	31.069548	2
TATAGTA	1130	29.963886	9
GTACATG	5415	29.643978	1
TACATGG	5410	29.275772	2