SRR6576886_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576886_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1299742
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4401	0.33860566173902207	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2928	0.2252754777486609	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2299	0.17688125797273613	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1559	0.11994688176576582	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1545	0.11886974491860693	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1459	0.11225304714320226	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1450	0.11156060202717154	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1448	0.11140672533472029	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1359	0.10455921252063871	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1324	0.10186637040274146	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1324	0.10186637040274146	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	570	58.545563	1
GTATCAA	2330	55.473713	1
TCAACGC	2860	44.029682	4
ATCAACG	2930	42.817417	3
CAACGCA	2995	41.888157	5
AACGCAG	3070	41.01788	6
TATCAAC	3575	35.497536	2
GTCTTAG	1115	32.458344	1
TTAGGTA	995	32.11165	4
ACGCAGA	3910	31.965513	7
GTACATG	4955	31.587194	1
CTTAGGT	1025	31.171799	3
CGCAGAG	4020	31.090837	8
TAGGTAT	985	31.006584	5
TACATGG	5090	30.472399	2
ACATGGG	5235	28.990963	3
TATAGTA	1280	27.531387	9
ACCTAAG	1490	27.44375	1
GCAGAGT	4555	27.439114	9
TCTTAGG	1285	27.432703	2