SRR6576885_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576885_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1348253
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4431	0.32864751645277257	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2955	0.21917251435746848	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2339	0.1734837600954717	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1567	0.11622447715673542	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1494	0.11081006309646632	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1484	0.11006836254026507	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1455	0.10791743092728147	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1418	0.10517313886933685	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1359	0.10079710558774947	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	680	56.874725	1
GTATCAA	2205	55.399464	1
TCAACGC	2755	43.671684	4
ATCAACG	2840	42.199123	3
CAACGCA	2900	41.32604	5
AACGCAG	3025	39.92908	6
TATCAAC	3470	35.214817	2
ACCTAAG	1445	32.966125	1
GTACATG	4985	31.600628	1
ACGCAGA	3840	31.453382	7
TACATGG	5010	31.050732	2
TAGGTAT	1025	30.7208	5
CTAAGAC	1660	30.294044	3
CGCAGAG	4040	30.012613	8
ACATGGG	5190	29.249384	3
TTAGGTA	1065	29.125668	4
GTCTTAG	1185	29.054867	1
CTTAGGT	1090	28.888823	3
AGGTATA	1060	28.819674	6
GGTAATC	425	28.750797	8