SRR6576872_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576872_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1315983
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4995	0.379564173701332	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3053	0.2319938783403737	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2682	0.20380202479819268	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1749	0.13290445241313908	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1672	0.12705331299872416	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1518	0.1153510341698943	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1514	0.11504707887563896	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1455	0.11056373828537298	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1367	0.10387672181175593	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1360	0.10334480004680913	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1337	0.10159705710484102	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	695	60.19956	1
GTATCAA	2720	56.688248	1
TCAACGC	3270	46.42414	4
ATCAACG	3300	46.002098	3
CAACGCA	3340	45.45118	5
AACGCAG	3445	44.338726	6
TATCAAC	4135	36.83474	2
ACGCAGA	4195	36.29962	7
CGCAGAG	4365	34.77822	8
GTCTTAG	995	32.59974	1
GTACATG	5720	31.887743	1
CTTAGGT	945	31.830044	3
TAGGTAT	1015	31.487047	5
AGGTATA	960	31.3327	6
GCAGAGT	4905	31.332699	9
TACATGG	5895	31.10061	2
ACATGGG	5980	30.415773	3
TTAGGTA	1060	29.263561	4
ACCTAAG	1620	29.018375	1
TAAGACA	1965	28.223349	4