SRR6576865_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576865_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1157804
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5287	0.45664032945127153	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3603	0.3111925679994196	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3127	0.2700802553800125	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1963	0.1695451043527229	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1793	0.15486213556007752	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1580	0.1364652393669395	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1534	0.132492200752459	No Hit
GGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAA	1391	0.12014123288570432	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1347	0.11634093508054903	No Hit
GTATGGATAGGAAGGGATGATGGTGGAGTCCTGGTGAGAAGTCTCCACTC	1340	0.11573634224791071	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1337	0.11547723103392284	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	1268	0.10951767311220206	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1246	0.10761752420962442	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1231	0.10632196813968513	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	1217	0.10511278247440844	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1210	0.10450818964177011	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1193	0.10303989276250557	No Hit
ATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGT	1188	0.10260804073919247	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	755	69.728874	1
GTATCAA	3000	49.511646	1
TCAACGC	3310	43.874863	4
ATCAACG	3345	43.556286	3
CAACGCA	3455	42.033516	5
AACGCAG	3535	41.082264	6
TATCAAC	3865	38.065926	2
CTTAGGT	1200	33.682358	3
TAGGTAT	1220	33.130188	5
ACGCAGA	4420	32.962845	7
TTAGGTA	1295	31.937298	4
CGCAGAG	4570	31.880917	8
AGGTATA	1260	31.705431	6
GTCTTAG	1290	31.700863	1
GGTATAG	1320	31.688475	7
GTACATG	5300	31.661676	1
TCTTAGG	1390	31.111044	2
TACATGG	5450	30.53151	2
ACATGGG	5550	29.808147	3
GCAGAGT	4945	29.463253	9