SRR6576861_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576861_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1336488
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5900	0.44145551624855595	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3609	0.27003609460017597	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2967	0.22199974859482466	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1807	0.13520510472222722	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1780	0.13318488456312366	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1764	0.13198771706143267	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1566	0.11717276922800653	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1564	0.11702312329029516	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1393	0.10422839561597261	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	1345	0.10063689311089963	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	840	0.0	67.304535	1
GTATCAA	2660	0.0	49.59281	1
TCAACGC	3165	0.0	40.69366	4
ATCAACG	3220	0.0	40.000076	3
CAACGCA	3295	0.0	39.088146	5
AACGCAG	3415	0.0	37.714622	6
TAGACCG	50	0.0017011254	37.604504	5
TATCAAC	3750	0.0	34.472088	2
TAGGTAT	1180	0.0	33.461636	5
CTAGACG	85	1.7531067E-5	33.181686	3
TTAGGTA	1190	0.0	33.180443	4
GTCTTAG	1355	0.0	32.683678	1
GTACATG	5575	0.0	32.62006	1
CTTAGGT	1220	0.0	31.980436	3
TACATGG	5740	0.0	31.93882	2
GTGCAAG	710	0.0	31.85116	1
ACCTAAG	1960	0.0	31.248533	1
ACATGGG	5885	0.0	31.151882	3
CTAAGAC	2150	0.0	30.390823	3
ACGCAGA	4275	0.0	30.012016	7