SRR6576858_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576858_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	495998
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1251	0.25221875894660867	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	743	0.1497989911249642	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	659	0.1328634389654797	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	621	0.1252021177504748	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	580	0.11693595538691688	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	574	0.11572627308981083	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	553	0.11149238504993972	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	539	0.10866979302335895	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	537	0.10826656559099028	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	531	0.10705688329388426	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	496	0.10000040322743237	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1275	0.0	47.585556	1
TCAACGC	1595	0.0	37.422436	4
ATCAACG	1645	0.0	36.570683	3
CAACGCA	1620	0.0	36.55481	5
AACGCAG	1645	0.0	35.999268	6
GTACATG	2625	0.0	32.609016	1
TACATGG	2635	0.0	32.485264	2
GGGTACC	435	0.0	32.41313	7
ACATGGG	2695	0.0	31.914005	3
TGGGTAC	470	0.0	29.999388	6
TATCAAC	2050	0.0	29.82532	2
ACGCAGA	1990	0.0	29.758186	7
GTACTAG	95	3.730524E-5	29.704569	1
CGCAGAG	2000	0.0	29.609396	8
GGTACCT	480	0.0	29.3744	8
ATGGGTA	525	0.0	28.647038	5
CATGGGG	1410	0.0	27.99943	4
GGTATCA	615	0.0	27.531067	1
ATGGGGG	480	0.0	27.416107	5
CATGGGT	690	0.0	27.245823	4