SRR6576847_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576847_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	529197
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1331	0.25151314160889043	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	706	0.1334096754138818	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	700	0.1322758821384097	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	683	0.12906346785790546	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	680	0.12849657122016941	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	643	0.12150484602142492	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	629	0.1188593283786567	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	565	0.10676553344028783	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	556	0.1050648435270797	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	543	0.10260829143022353	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	539	0.10185242924657548	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	531	0.10034070487927936	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1210	0.0	51.278915	1
TACGTGT	50	3.0151512E-5	46.97902	4
ACGGCGT	45	0.0010156876	41.759132	8
ATCAACG	1575	0.0	38.478058	3
CGCTAAA	50	0.001704932	37.583218	5
CAACGCA	1650	0.0	37.013775	5
TCAACGC	1645	0.0	36.840694	4
AACGCAG	1710	0.0	35.715046	6
GGTATCA	500	0.0	33.844086	1
GTACATG	2630	0.0	33.601013	1
TACATGG	2635	0.0	33.358864	2
GGTACCT	525	0.0	33.109028	8
ACATGGG	2665	0.0	32.612083	3
GGGTACC	565	0.0	31.59651	7
CTAGTAC	75	3.2817508E-4	31.31935	3
CCCGCTA	60	0.004168067	31.31935	3
TGGGTAC	540	0.0	30.449366	6
ACGCAGA	2035	0.0	30.011171	7
ATGGGTA	595	0.0	30.003412	5
TATCAAC	2060	0.0	29.207409	2