SRR6576842_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576842_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	521204
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1977	0.37931404977705463	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1236	0.2371432299061404	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1171	0.2246721053560602	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	711	0.13641491623241572	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	679	0.13027528568468394	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	632	0.12125770331770287	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	600	0.11511807276997107	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	582	0.11166453058687194	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	562	0.10782726149453957	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	940	0.0	51.486385	1
GGTATCA	205	0.0	48.133617	1
ATCAACG	1135	0.0	40.98476	3
TCAACGC	1145	0.0	40.626812	4
TATCAAC	1180	0.0	39.421783	2
CAACGCA	1190	0.0	38.69565	5
AACGCAG	1240	0.0	37.13534	6
GCCTAAC	55	0.0027191741	34.172783	1
GCGTAGT	55	0.0027191741	34.172783	1
TAGGTAT	580	0.0	34.025486	5
TACATGG	2040	0.0	33.858692	2
CTTAGGT	585	0.0	33.734673	3
GTACATG	2110	0.0	32.73542	1
TTAGGTA	615	0.0	32.089077	4
AGGTATA	640	0.0	31.569777	6
TAAGGCG	60	0.004164298	31.325052	9
ACTTAAG	210	0.0	31.32505	1
GTCTTAG	665	0.0	31.089527	1
ACATGGG	2210	0.0	31.041565	3
GGTATAG	655	0.0	30.846806	7