SRR6576775_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576775_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	543222
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1169	0.21519746991101243	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	969	0.17838010978936789	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	835	0.153712478507866	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	833	0.15334430490664958	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	744	0.13696057965251776	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	667	0.1227858960056846	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	617	0.11358155597527347	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	547	0.10069547993269787	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1610	0.0	57.508698	1
CGTAGAC	25	0.0052328724	56.404587	2
CCCGCTA	70	8.610732E-8	46.99084	3
GCAAACG	100	7.039489E-10	42.299545	1
ATCAACG	2255	0.0	40.635094	3
TCAACGC	2340	0.0	38.958218	4
AACGCAG	2360	0.0	38.827175	6
CAACGCA	2355	0.0	38.71008	5
ACGCAGA	2650	0.0	34.400845	7
CGCAGAG	2690	0.0	33.889305	8
CCGCTAA	70	2.1859915E-4	33.564888	4
TATCAAC	2775	0.0	33.199093	2
TGCCCGC	175	5.456968E-12	32.22822	1
GGTATCA	625	0.0	30.079676	1
GTACATG	3230	0.0	29.974909	1
GCAGAGT	3070	0.0	29.691803	9
TACATGG	3195	0.0	29.423363	2
ACATGGG	3185	0.0	29.212515	3
GCGGTAT	145	2.654997E-8	29.172098	1
TACACCG	100	5.325504E-5	28.194504	5