SRR6576769_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576769_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	137837
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	353	0.2560995958995045	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	303	0.21982486560212425	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	203	0.14727540500736377	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	186	0.1349419967062545	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	167	0.12115759919325	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	165	0.1197066099813548	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	164	0.11898111537540718	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	161	0.11680463155756438	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	146	0.10592221246835029	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	144	0.1044712232564551	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGTAA	45	0.0010111942	41.77487	5
GTATTTA	50	0.0016853391	37.652035	1
GTTTAGT	50	0.0016853391	37.652035	1
TAGTACT	50	0.001697414	37.597385	4
TCCTAGG	65	1.4076209E-4	36.151333	2
GTATCAA	555	0.0	35.61679	1
TTAAGCA	55	0.0027096795	34.179443	4
TATTACA	55	0.0027096795	34.179443	4
CTAGGTA	55	0.0027096795	34.179443	4
TTTATTC	85	1.7444803E-5	33.174164	3
TGGGAGT	60	0.0041498123	31.331158	6
TCAACGC	675	0.0	30.634909	4
ATCAACG	680	0.0	30.40965	3
AACGCAG	685	0.0	30.187685	6
TTATTCT	95	3.7303937E-5	29.682148	4
CAACGCA	710	0.0	29.124737	5
GTACTTG	85	6.7307893E-4	27.685318	1
TATCAAC	740	0.0	27.308912	2
ATCCTAG	70	0.008750293	26.894312	1
GCTCGAT	35	0.008827574	26.855276	64-65