SRR6576757_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576757_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	316484
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	859	0.27141972421986577	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	552	0.17441640019716637	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	431	0.13618381971916432	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	410	0.1295484131899243	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	382	0.12070120448427094	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	378	0.11943731752632045	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	371	0.11722551534990709	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	341	0.10774636316527851	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	320	0.10111095663603846	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	905	0.0	47.25474	1
CATGGGT	570	0.0	39.568573	4
GTACATG	1910	0.0	36.169006	1
TACATGG	1960	0.0	35.486095	2
ATCAACG	1125	0.0	35.08413	3
ATGGGTA	295	0.0	35.041653	5
TCAACGC	1150	0.0	34.32143	4
ACATGGG	2035	0.0	34.172855	3
AACGCAG	1170	0.0	34.136345	6
CAACGCA	1170	0.0	33.73474	5
GTATAAC	60	0.0041585886	31.330069	1
GCAAACG	75	3.27222E-4	31.330067	1
GGTACCT	315	0.0	31.325119	8
GTTAGAC	60	0.004161807	31.325117	3
GGGTACC	305	0.0	30.81159	7
GGTATCA	415	0.0	30.575127	1
ACGCAGA	1290	0.0	30.232382	7
TATCAAC	1345	0.0	29.3501	2
CGCAGAG	1330	0.0	29.323135	8
GCGCTCT	65	0.0061554024	28.915495	94