SRR6576756_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576756_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	342940
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	849	0.24756517175016038	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	548	0.15979471627689976	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	458	0.13355105849419724	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	417	0.12159561439318832	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	382	0.1113897474776929	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	361	0.10526622732839565	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	354	0.10322505394529656	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	347	0.10118388056219746	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	655	0.0	50.944115	1
GTACATG	2090	0.0	40.92626	1
TACATGG	2115	0.0	40.88692	2
ACATGGG	2210	0.0	38.278706	3
ATTAGGG	50	0.001700764	37.598194	2
GTATAGG	90	6.1757237E-7	36.553795	1
TCAACGC	940	0.0	34.498337	4
ATCAACG	950	0.0	33.640488	3
AACGCAG	980	0.0	33.569813	6
TAAGGTA	70	2.1824351E-4	33.569813	4
ATAAGAC	85	1.7517856E-5	33.174877	3
CAACGCA	980	0.0	33.090244	5
TACACTA	100	1.4078687E-6	32.89842	5
CATGGGT	655	0.0	31.571001	4
TAATGGT	135	1.3220415E-8	31.33183	4
ATTGACT	60	0.004157928	31.331827	8
CATGGGG	750	0.0	30.705189	4
CATGGGA	1070	0.0	29.867722	4
ACGCAGA	1095	0.0	29.615013	7
CGCAGAG	1130	0.0	28.697735	8