SRR6576746_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576746_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106283
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	263	0.24745255591204612	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	178	0.16747739525606165	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	170	0.15995032131196898	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	168	0.1580685528259458	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	165	0.15524590009691108	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	147	0.1383099837227026	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	128	0.12043318310548254	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	125	0.11761053037644778	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	114	0.10726080370332039	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCATAT	25	0.0052257	56.392662	7
ATGGGAT	125	0.0	48.87364	5
CATGGGT	175	0.0	45.6512	4
GTACATG	890	0.0	44.39556	1
TACATGG	880	0.0	44.323772	2
ACATGGG	900	0.0	43.338802	3
GTATCAA	480	0.0	42.138348	1
TACTAAA	60	8.776841E-5	39.16157	2
CATGGGC	170	0.0	38.700844	4
GCCTAGT	50	0.0016961693	37.595108	2
TGGGATG	75	7.3866977E-6	37.595108	6
ATGGGTA	95	9.3533527E-7	34.62707	5
AACGCAG	620	0.0	33.3505	6
CATGGGA	500	0.0	32.895718	4
ATCAACG	635	0.0	31.82263	3
CACTCTA	120	1.6168815E-7	31.358768	9
AACCTCG	105	2.0292337E-6	31.358767	9
ATGGCGG	30	0.0041560703	31.329256	40-41
GTATGGT	60	0.0041468046	31.329256	3
CTAGATA	105	2.0442221E-6	31.329254	3