SRR6576742_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576742_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	340898
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	836	0.24523464496711625	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	488	0.1431513238564028	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	483	0.14168460947262818	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	429	0.1258440941278623	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	424	0.12437737974408766	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	383	0.1123503217971358	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	373	0.10941689302958657	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	348	0.10208332111071347	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1030	0.0	42.02703	1
CCGCGAT	45	0.0010111001	41.7933	9
GTACATG	2190	0.0	38.458027	1
CATGGGT	600	0.0	38.37507	4
ACATGGG	2210	0.0	37.421806	3
ATGGGTA	370	0.0	36.829903	5
TACATGG	2270	0.0	36.645058	2
AACGCAG	1300	0.0	32.16999	6
TCAACGC	1340	0.0	31.560368	4
TTAGCAC	75	3.27488E-4	31.326586	3
ATCAACG	1350	0.0	31.326586	3
CAACGCA	1350	0.0	30.978512	5
GGTACCT	340	0.0	30.423065	8
GGGAGTC	140	1.8866558E-8	30.207779	7
GGGTACC	350	0.0	29.536497	7
TATCAAC	1525	0.0	28.660326	2
CATGGGA	1115	0.0	28.657501	4
ACGCAGA	1480	0.0	28.257425	7
CGCAGAG	1505	0.0	27.804348	8
CTACTAG	70	0.008779974	26.886858	1