SRR6576742_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576742_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	340898
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	880	0.2581417315443329	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	492	0.1443246953634225	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	476	0.1396312093353437	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	475	0.13933786645858878	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	465	0.13640443769103955	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	419	0.12291066536031306	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	363	0.10648346426203734	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	353	0.1035500354944881	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAATAG	45	0.0010122192	41.78391	1
GTATCAA	1010	0.0	40.956505	1
GTACATG	2210	0.0	37.22266	1
TACATGG	2325	0.0	35.179356	2
ACATGGG	2305	0.0	34.85745	3
AACGCAG	1135	0.0	34.773937	6
TAATAGA	55	0.002712387	34.186832	2
ATCAACG	1200	0.0	33.2819	3
CAACGCA	1205	0.0	33.1438	5
TCAACGC	1240	0.0	32.208294	4
CATGGGG	820	0.0	31.51514	4
GCATTAT	60	0.004153927	31.33793	1
TTCCGAC	105	2.0644566E-6	31.32414	7
TATCAAC	1415	0.0	29.233973	2
CCGACCA	115	4.194584E-6	28.600304	9
CATGGGT	615	0.0	28.268127	4
CATGGGA	1135	0.0	28.15033	4
ACGCAGA	1440	0.0	27.734917	7
CGCAGAG	1450	0.0	27.543642	8
TCCGACC	120	5.840695E-6	27.408625	8