SRR6576738_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576738_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	354335
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	800	0.22577504339114113	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	563	0.1588891867865156	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	497	0.14026274570674643	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	468	0.13207840038381757	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	416	0.1174030225633934	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	404	0.1140163969125263	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	395	0.11147642767437595	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	384	0.10837202082774776	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	362	0.10216320713449137	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1130	0.0	47.000137	1
GTACATG	2720	0.0	43.025864	1
TACATGG	2725	0.0	42.601963	2
ACATGGG	2850	0.0	39.89763	3
GTACTAG	80	1.1563667E-5	35.250107	1
CATGGGA	1575	0.0	35.202866	4
ATCAACG	1520	0.0	34.00366	3
AACGCAG	1550	0.0	33.648666	6
TATATGG	70	2.1819254E-4	33.57153	2
TCAACGC	1565	0.0	33.326153	4
CAACGCA	1590	0.0	32.80216	5
ATGGGAT	480	0.0	32.30348	5
CATGGGT	635	0.0	31.817883	4
TTTTACG	60	0.0041570696	31.33343	2
ATGGGAG	690	0.0	30.643616	5
ATGGGCG	95	3.752178E-5	29.67592	5
TATCAAC	1770	0.0	29.474665	2
TGCGACG	40	4.786875E-4	29.366796	22-23
CGCACTA	40	4.786875E-4	29.366796	58-59
TATACGG	65	0.006148409	28.923164	2