SRR6576734_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576734_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	672243
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1348	0.2005227276446166	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	976	0.14518559508987078	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	971	0.14444181642650053	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	843	0.1254010826442224	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	825	0.12272347945608954	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	750	0.11156679950553594	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	748	0.11126928804018786	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	720	0.10710412752531452	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	695	0.1033852342084633	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	675	0.10041011955498236	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	674	0.1002613638223083	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1550	0.0	52.937286	1
CAACGCA	2065	0.0	39.832558	5
TCAACGC	2065	0.0	39.832558	4
ATCAACG	2065	0.0	39.607887	3
GTACATG	3930	0.0	39.23732	1
AACGCAG	2105	0.0	38.849464	6
TACATGG	4010	0.0	37.97984	2
ACATGGG	4085	0.0	37.0524	3
CATGGGA	2185	0.0	33.342674	4
ACGCAGA	2545	0.0	32.13047	7
TATCAAC	2620	0.0	31.39708	2
CGCAGAG	2615	0.0	31.090662	8
ATGGGAG	985	0.0	29.58528	5
ATGGGTA	620	0.0	29.566038	5
GGTATCA	595	0.0	29.324383	1
CATGGGG	1430	0.0	29.253252	4
GGGTACC	615	0.0	27.509518	7
GCAGAGT	3010	0.0	27.01066	9
TACTGCG	70	0.008837653	26.854528	7
CATGGGT	1105	0.0	26.372398	4