SRR6576703_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576703_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	325206
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	775	0.23831048627639098	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	533	0.1638961150778276	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	411	0.12638143207689895	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	387	0.119001494437372	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	356	0.10946907498631638	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	354	0.10885408018302245	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	348	0.1070090957731407	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	333	0.10239663474843638	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	880	0.0	44.985714	1
TACATGG	1790	0.0	36.506462	2
GTACATG	1840	0.0	36.370438	1
ATCAACG	1090	0.0	35.798065	3
ACATGGG	1845	0.0	34.90858	3
AACGCAG	1165	0.0	34.29527	6
TCAACGC	1170	0.0	33.345207	4
CAACGCA	1180	0.0	33.062622	5
CATGGGG	715	0.0	32.213005	4
ACGCAGA	1290	0.0	30.607702	7
CATGGGT	530	0.0	29.267073	4
CGCAGAG	1360	0.0	29.027845	8
AAACGCA	65	0.006144773	28.925962	5
CGCGGTA	65	0.006149392	28.921516	94
ATGGGTA	360	0.0	28.725086	5
TGGGTAC	315	0.0	28.352036	6
TATAGCC	100	5.3027907E-5	28.207151	2
GGGTACC	300	0.0	28.202814	7
GGTACCT	300	0.0	28.198479	8
GTGTAGG	155	4.928188E-8	27.364582	1