SRR6576701_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576701_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	257488
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	625	0.24272975827999752	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	385	0.14952153110047847	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	331	0.12854967998508668	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	277	0.1075778288696949	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	273	0.10602435841670292	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	271	0.10524762319020693	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	265	0.10291741751071895	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	259	0.10058721183123097	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	700	0.0	47.71027	1
GCTAGAC	40	5.672855E-4	46.992622	3
CTTACAC	50	3.0056599E-5	46.99262	3
GTACATG	1565	0.0	44.182938	1
TACATGG	1605	0.0	43.03997	2
GGACTAA	45	0.0010132713	41.771217	6
ACATGGG	1660	0.0	41.04777	3
ATCAACG	885	0.0	37.700294	3
AACGCAG	910	0.0	36.664574	6
TGTATAG	65	1.4117488E-4	36.14817	5
TCAACGC	925	0.0	36.07001	4
GTATAGC	80	1.1564083E-5	35.244465	6
CAACGCA	970	0.0	34.88112	5
TATCAAC	990	0.0	34.651123	2
CATGGGT	425	0.0	34.27697	4
CATGGGA	810	0.0	33.649036	4
CTTATAG	85	1.7514023E-5	33.17126	3
CGCAGAG	1030	0.0	32.87475	8
ACGCAGA	1040	0.0	32.0815	7
GTATAGT	60	0.004138504	31.358864	1