SRR6576696_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576696_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	160188
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	375	0.23409993257921943	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	224	0.13983569306065372	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	224	0.13983569306065372	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	199	0.12422903088870577	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	198	0.12360476440182785	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	181	0.11299223412490322	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	175	0.10924663520363574	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	169	0.10550103628236822	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAGACG	25	0.005229076	56.39663	9
TCTATAC	45	1.6082355E-5	52.2191	3
ATGGGAC	85	1.4188117E-10	49.76173	5
TACATGG	1055	0.0	41.454685	2
GTACATG	1055	0.0	41.008938	1
ACATGGG	1035	0.0	40.867123	3
ACTAGGC	60	8.793194E-5	39.164326	3
GTACTAG	50	0.001692951	37.621243	1
CTAAGAC	65	1.4085614E-4	36.151684	3
CATTATA	80	1.1479871E-5	35.269917	2
ATTATAC	55	0.002710859	34.17977	3
ACAGTAC	70	2.1774136E-4	33.56942	8
CATCGTC	70	2.1774136E-4	33.56942	9
CATGGGG	395	0.0	33.314465	4
CATGGGT	240	0.0	33.289677	4
GTATCAA	475	0.0	32.67108	1
TAGGCAT	60	0.0041516093	31.33146	5
CATGGGA	575	0.0	31.059013	4
ATGGGTG	95	3.7338898E-5	29.682438	5
GTATTAA	80	4.7470053E-4	29.391598	1