SRR6576694_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576694_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	455818
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1072	0.23518158563286223	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	710	0.15576392332027256	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	636	0.13952937356576528	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	595	0.13053455545853826	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	586	0.12856008319109818	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	549	0.12044280831384456	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	535	0.11737140700893778	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	526	0.11539693474149772	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	501	0.10991228955416416	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	493	0.10815720309421742	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	485	0.10640211663427071	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1085	0.0	40.36802	1
GTACATG	2630	0.0	36.888897	1
GTCTTAA	65	1.3952967E-4	36.227707	1
TACATGG	2765	0.0	35.01852	2
ACATGGG	2875	0.0	34.00566	3
AACGTTA	30	0.004161461	31.331907	20-21
ATGGGAG	570	0.0	30.51073	5
CATGGGG	1370	0.0	30.191717	4
ATGGGGA	775	0.0	29.718035	5
CATGGGA	1150	0.0	29.427977	4
TCAACGC	1445	0.0	29.275236	4
CATATAG	65	0.0060892957	28.982166	1
GGTATCA	585	0.0	28.982166	1
CCATATA	65	0.006148397	28.924934	2
TATACTA	65	0.006148397	28.924934	3
ATCAACG	1480	0.0	28.582916	3
CAACGCA	1485	0.0	28.486677	5
AACGCAG	1485	0.0	28.486677	6
GTATAGG	100	5.2431285E-5	28.257612	1
CCCGATA	85	6.807179E-4	27.648834	94