SRR6576672_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576672_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	337389
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	838	0.24837798505582576	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	568	0.16835166528843562	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	519	0.15382837021953888	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	474	0.14049065025830718	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	448	0.1327844120584844	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	443	0.1313024431739031	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	434	0.12863489918165677	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	375	0.11114766634359745	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	363	0.10759094102060233	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	356	0.10551618458218852	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	350	0.10373782192069096	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	885	0.0	45.22082	1
AACGCAG	1070	0.0	36.018013	6
ATCAACG	1105	0.0	35.302498	3
CATGGGT	515	0.0	34.678955	4
CAACGCA	1135	0.0	34.369392	5
TCAACGC	1135	0.0	34.369392	4
CATAAGA	55	0.002714553	34.18117	2
GTACATG	1780	0.0	33.0638	1
GTATAAA	130	8.991265E-9	32.59582	1
ACATGGG	1840	0.0	31.928745	3
TACATGG	1855	0.0	31.923923	2
GTAAGAC	60	0.004157239	31.33274	3
ACGCAGA	1265	0.0	30.465824	7
TGGGTAC	375	0.0	30.079432	6
GTCCTAA	95	3.699755E-5	29.736536	1
CGCAGAG	1315	0.0	29.30743	8
TATCAAC	1350	0.0	29.24389	2
GGTACCT	370	0.0	29.215664	8
GGGTACC	390	0.0	28.922527	7
ATGGGTA	410	0.0	28.657993	5