SRR6576661_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576661_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	416847
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1060	0.25428994331253435	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	704	0.16888690574719262	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	585	0.14033926116776657	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	575	0.13794029943840308	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	537	0.12882424486682165	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	509	0.12210715202460375	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	496	0.11898850177643117	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	450	0.10795327782135891	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	450	0.10795327782135891	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	449	0.10771338164842256	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	429	0.10291545818969551	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	895	0.0	55.15093	1
TCAACGC	1240	0.0	38.65991	4
ATCAACG	1235	0.0	38.435875	3
CAACGCA	1265	0.0	37.52435	5
AACGCAG	1305	0.0	37.09446	6
GTACATG	2405	0.0	36.943096	1
TACATGG	2490	0.0	35.304398	2
ACATGGG	2450	0.0	35.104866	3
CATATAG	85	1.7525395E-5	33.175285	3
GGTATCA	375	0.0	32.593323	1
CATGGGT	785	0.0	31.73135	4
ATGGGTA	460	0.0	31.672783	5
ACGCAGA	1545	0.0	31.028017	7
TATCAAC	1635	0.0	29.61461	2
CGCAGAG	1630	0.0	29.409992	8
GGTACCT	465	0.0	29.310781	8
ATGGGAT	405	0.0	27.850857	5
GGGTACC	490	0.0	27.81533	7
CATGGGA	1275	0.0	27.64607	4
GCAGAGT	1805	0.0	26.558607	9