SRR6576582_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576582_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	447500
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1173	0.26212290502793295	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	727	0.16245810055865922	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	666	0.14882681564245812	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	620	0.13854748603351955	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	563	0.12581005586592178	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	542	0.12111731843575418	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	495	0.11061452513966481	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	487	0.10882681564245811	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	456	0.10189944134078213	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	452	0.10100558659217877	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGTCG	45	0.0010141928	41.77023	5
ACATGGG	2775	0.0	36.74651	3
GTACATG	2870	0.0	36.516647	1
TACATGG	2865	0.0	36.08826	2
GTATCAA	1375	0.0	35.204845	1
GGTACCT	525	0.0	34.009098	8
GGGTACC	540	0.0	33.93452	7
CATGGGT	815	0.0	32.865227	4
ATGGGTA	600	0.0	32.110867	5
TGGGTAC	585	0.0	31.327673	6
ATGGGAG	540	0.0	31.327671	5
TAGGGTG	95	3.7518366E-5	29.678844	5
GCGTTAT	80	4.778198E-4	29.372974	1
AACGCAG	1600	0.0	29.075994	6
CATGGGG	1185	0.0	28.948355	4
TATAGGT	65	0.006155637	28.917852	4
CATGGGA	1250	0.0	28.570839	4
ATCAACG	1715	0.0	27.400295	3
TCAACGC	1715	0.0	27.400295	4
ACTGCGC	70	0.008842961	26.84929	8