SRR6576571_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576571_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	186466
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	429	0.23006875248034495	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	280	0.15016142353029505	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	246	0.13192753638733068	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	231	0.12388317441249343	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	230	0.12334688361417094	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	226	0.12120172042088101	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	222	0.11905655722759109	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	203	0.10886703205946394	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	201	0.10779445046281896	No Hit
GATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTAT	189	0.10135896088294917	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGTGC	20	0.0021623317	70.481895	6
TAGATTG	50	3.004215E-5	46.987934	5
ACATGGG	1155	0.0	39.461727	3
GTACATG	1210	0.0	39.252914	1
TACATGG	1190	0.0	39.122276	2
GTATCAA	475	0.0	34.650566	1
CATGGGG	470	0.0	33.99127	4
CATGGGC	240	0.0	33.28312	4
CATGGGT	270	0.0	31.325289	4
GAGTGCG	60	0.0041573504	31.325289	9
ATAGCCC	60	0.0041573504	31.325289	3
GTCTTAT	80	4.7504302E-4	29.391104	1
TAGTGCT	80	4.7728824E-4	29.367458	7
CCCTCGT	65	0.0061488417	28.915653	7
AGATAGT	65	0.0061488417	28.915653	6
TATGCAG	65	0.0061488417	28.915653	5
GATTGGC	65	0.0061488417	28.915653	7
AACGCAG	590	0.0	27.874197	6
ATGGGTA	135	4.6100286E-7	27.844702	5
TATTATG	85	6.7727885E-4	27.662214	2