SRR6576552_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576552_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	379865
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	869	0.2287654824740368	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	583	0.15347557684967028	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	581	0.15294907401313626	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	467	0.12293841233069643	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	460	0.12109565240282733	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	445	0.11714688112882207	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	424	0.11161860134521476	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	417	0.10977584141734563	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	410	0.10793308148947653	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	396	0.1042475616337383	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1065	0.0	49.569115	1
GTACATG	2585	0.0	39.20312	1
TACATGG	2610	0.0	38.36008	2
ACATGGG	2565	0.0	37.93354	3
CATGGGA	1330	0.0	35.33716	4
ATCAACG	1465	0.0	34.97271	3
CAACGCA	1495	0.0	34.580776	5
TCAACGC	1510	0.0	34.23726	4
AACGCAG	1535	0.0	33.985832	6
CAACTAG	60	0.0040995735	31.423277	1
ATGGGAG	630	0.0	31.332281	5
TATCAAC	1695	0.0	30.504465	2
ACGCAGA	1765	0.0	29.55708	7
GGTATCA	435	0.0	29.256155	1
GTAATAG	65	0.006063521	29.006104	1
CCCTTAT	65	0.006063521	29.006104	1
CATGGGG	975	0.0	28.922106	4
ATGGGTA	425	0.0	28.751976	5
CGCAGAG	1805	0.0	28.641695	8
ATGGGAT	430	0.0	28.417648	5