SRR6576551_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576551_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	314626
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	807	0.2564950131266965	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	548	0.17417505228429947	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	470	0.14938371272558532	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	455	0.1446161474258326	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	435	0.13825939369282894	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	425	0.13508101682632714	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	406	0.1290421007799737	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	405	0.1287242630933235	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	364	0.11569291794066607	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	344	0.10933616420766243	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	320	0.10170805972805808	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1010	0.0	43.745308	1
GTACGTA	45	0.0010141053	41.767113	6
AACGCAG	1170	0.0	38.15265	6
ATGGGTA	360	0.0	36.546223	5
ATCAACG	1200	0.0	36.4157	3
TCAACGC	1220	0.0	35.818726	4
CAACGCA	1235	0.0	35.38368	5
GTACATG	2135	0.0	35.224686	1
TACATGG	2175	0.0	34.36077	2
ACATGGG	2190	0.0	34.114574	3
ACGCAGA	1400	0.0	31.884714	7
AATAACC	75	3.2689766E-4	31.335295	2
ATGGGAT	270	0.0	31.325335	5
AGAGTTA	90	2.5925061E-5	31.325335	6
CTAGTAC	75	3.2750785E-4	31.325335	3
GGTACCT	305	0.0	30.811806	8
ACCCTTG	185	9.094947E-12	30.478704	7
CATGGGT	540	0.0	30.455187	4
GTCCTAC	110	2.9579733E-6	29.910963	1
CGCAGAG	1495	0.0	29.858597	8