SRR6576550_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576550_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	347919
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	812	0.23338765632230488	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	509	0.14629842003454827	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	499	0.14342418781383023	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	450	0.12934044993231184	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	395	0.11353217271836262	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	389	0.11180763338593178	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	382	0.10979567083142916	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	366	0.1051968992782803	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	357	0.10261009027963405	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	885	0.0	51.064884	1
ATCAACG	1065	0.0	40.160484	3
AACGCAG	1130	0.0	38.266304	6
ACATGGG	1995	0.0	38.166233	3
CAACGCA	1135	0.0	38.097733	5
TCAACGC	1130	0.0	37.85037	4
GTACATG	2020	0.0	37.28748	1
TACATGG	2060	0.0	36.733795	2
CATGGGG	935	0.0	34.685234	4
CATGGGA	780	0.0	33.744312	4
GGTATCA	350	0.0	33.625313	1
ACGCAGA	1320	0.0	32.397552	7
GTACTAG	90	2.5605405E-5	31.383627	1
TATCAAC	1380	0.0	31.334003	2
ATGGGAT	245	0.0	30.694534	5
CGCAGAG	1405	0.0	30.43756	8
ATGGGTA	315	0.0	29.841908	5
ACGAGTC	40	4.7823894E-4	29.371408	26-27
GCAGAGT	1530	0.0	27.95083	9
CATGGGT	530	0.0	27.491154	4