SRR6576550_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576550_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	347919
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	905	0.2601180159749827	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	584	0.16785516168993359	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	467	0.1342266447075325	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	451	0.12962787315438365	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	440	0.1264662177115938	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	426	0.12244229260258853	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	424	0.12186744615844491	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	408	0.11726867460529605	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	363	0.10433462961206487	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	357	0.10261009027963405	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAG	50	3.00257E-5	47.00661	1
GTATCAA	905	0.0	43.111034	1
CCCGCTA	45	0.0010129951	41.77765	3
GTACATG	1970	0.0	41.518528	1
ACATGGG	1980	0.0	40.353416	3
TACATGG	2065	0.0	39.38084	2
CATGGGG	920	0.0	38.82597	4
ATGGGAT	230	0.0	38.82597	5
ATGGGCG	65	1.41149E-4	36.153736	5
GGGACCG	65	1.41149E-4	36.153736	5
GACATAT	55	0.0027125457	34.186626	1
TATAGCT	55	0.0027144584	34.181713	4
AACGCAG	1115	0.0	32.4573	6
ATCAACG	1135	0.0	32.29946	3
TCAACGC	1135	0.0	32.29946	4
CATATAG	75	3.2709428E-4	31.333237	3
CAACGCA	1180	0.0	31.067703	5
CATGGGA	880	0.0	30.977177	4
TAGTACT	65	0.006148442	28.92299	4
ACGCAGA	1280	0.0	28.273352	7