SRR6576516_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576516_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	149288
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	429	0.28736402122072774	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	287	0.19224586035046354	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	240	0.16076308879481271	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	198	0.1326295482557205	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	179	0.1199024703927978	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	168	0.1125341621563689	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	167	0.11186431595305718	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	154	0.10315631531000481	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCGAT	20	0.0021619105	70.478386	94
TTATGAT	25	0.0052334885	56.382713	4
ATGGGTA	170	0.0	41.457874	5
ATCCTAT	50	0.0016970473	37.601074	1
TAATCAT	50	0.0016998443	37.588478	5
CATGGGT	220	0.0	36.307053	4
CTCTTAA	65	1.4073681E-4	36.154877	1
GTATCAA	395	0.0	35.697224	1
ACATGGG	855	0.0	31.873268	3
GTACATG	845	0.0	31.705046	1
GGTACCT	165	8.54925E-11	31.32373	8
TGGGTAC	165	8.54925E-11	31.32373	6
GGGTACC	165	8.54925E-11	31.32373	7
TATACTC	75	3.2678785E-4	31.323729	3
CATGGGG	410	0.0	30.941732	4
TACATGG	875	0.0	30.618013	2
CTTAATC	80	4.7697593E-4	29.365995	3
ATCAACG	480	0.0	28.387129	3
TCAACGC	490	0.0	27.807798	4
CAACGCA	505	0.0	26.981827	5