SRR6576511_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576511_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	235139
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	461	0.1960542487634973	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	346	0.14714700666414335	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	287	0.12205546506534433	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	244	0.10376840932384673	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	243	0.1033431289577654	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	815	0.0	41.577545	1
GTACATG	1675	0.0	38.21273	1
TACATGG	1680	0.0	37.77059	2
CTAATAG	75	7.425542E-6	37.594723	3
ACATGGG	1685	0.0	37.371613	3
ATCAACG	955	0.0	32.969196	3
AACGCAG	980	0.0	32.60767	6
TCAACGC	980	0.0	32.128147	4
CAACGCA	990	0.0	31.80362	5
GGTTAGC	60	0.0041441964	31.34894	8
CATGGGA	830	0.0	30.00784	4
ACGCAGA	1085	0.0	29.45209	7
CGCAGAG	1095	0.0	29.201754	8
ACGGACC	65	0.006129415	28.937483	8
CGGACCA	65	0.006129415	28.937483	9
CATGGGG	705	0.0	28.662645	4
CATGGGT	430	0.0	28.41462	4
TATCAAC	1125	0.0	28.410944	2
ATGGGAT	265	0.0	28.373379	5
GCAGAGT	1170	0.0	27.329845	9