SRR6576498_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576498_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	396558
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	919	0.23174415848375268	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	545	0.1374326075882973	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	527	0.13289354898905079	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	510	0.12860666031198464	No Hit
CCTATAAGCAGTTCTTGTATTTTTATTCACACAGGTCTGATTAAGATGAA	476	0.12003288295785232	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	454	0.11448514466988437	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	406	0.10238098840522698	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	397	0.10011145910560372	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGTAT	15	6.8824936E-4	94.056145	8
CCGTATG	25	0.005221161	56.433693	9
TACCGTA	25	0.005234212	56.39811	7
GTATCAA	970	0.0	47.06965	1
GTACCGT	40	5.673134E-4	46.99842	6
GTACATG	2460	0.0	40.37275	1
GCCTAGT	70	4.5806974E-6	40.345417	1
ACATGGG	2350	0.0	40.193584	3
TACATGG	2475	0.0	39.872425	2
CATGGGG	1190	0.0	38.30481	4
ATCAACG	1200	0.0	37.202393	3
TCAACGC	1195	0.0	36.964813	4
AACGCAG	1215	0.0	35.974106	6
CAACGCA	1265	0.0	34.919327	5
ATGGGTA	345	0.0	34.052532	5
GTACTAA	70	2.1635278E-4	33.62118	1
TATCAAC	1425	0.0	32.317646	2
ACGCAGA	1425	0.0	31.00247	7
CGCAGAG	1460	0.0	29.95624	8
GTATCAC	80	4.7340666E-4	29.418531	1