SRR6576494_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576494_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	276368
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	638	0.23085161813234528	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	355	0.12845191918022347	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	291	0.10529439008857755	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	288	0.10420888091240664	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGCTA	30	1.3710758E-4	62.650505	3
CCGCTAA	40	5.6764076E-4	46.987873	4
ACCTAGC	45	0.0010139041	41.767002	6
GTATCAA	735	0.0	41.584003	1
TGCCCGC	85	3.9267616E-7	38.723923	1
GATATAC	50	0.0016959026	37.61753	1
CGCTAAA	50	0.001701946	37.5903	5
CATGGGT	395	0.0	34.49743	4
GTACTAG	55	0.0027072586	34.19775	1
GTACATG	1710	0.0	32.99783	1
TACATGG	1670	0.0	32.943493	2
AACGCAG	950	0.0	32.644207	6
ATCAACG	945	0.0	32.319702	3
ACATGGG	1675	0.0	32.260334	3
TCAACGC	955	0.0	31.98128	4
GCTATAC	60	0.004160814	31.325253	3
GTTGTAC	60	0.004160814	31.325253	3
CAACGCA	980	0.0	31.16543	5
GTATATC	80	4.7585895E-4	29.38869	1
GTATAGG	65	0.0061322083	28.936558	1