SRR6576438_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576438_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	308889
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	727	0.2353596275684793	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	417	0.1349999514388664	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	408	0.13208628342220022	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	365	0.11816542512035069	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	332	0.10748197572590802	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	323	0.10456830770924183	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	315	0.10197838058331635	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	310	0.1003596761296129	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAACGC	20	0.0021627632	70.48944	3
GTACATG	1845	0.0	38.78413	1
GTATCAA	905	0.0	38.493732	1
ACATGGG	1890	0.0	37.793278	3
TACATGG	1915	0.0	37.060497	2
CATGGGT	515	0.0	34.674416	4
GATATAA	70	2.1604956E-4	33.62628	1
ATGGGTA	345	0.0	32.690754	5
AACGCAG	1060	0.0	31.476414	6
TAAGGTC	60	0.0041593644	31.328638	5
ATGGGAG	425	0.0	29.854351	5
CAACGCA	1120	0.0	29.790178	5
ATCAACG	1090	0.0	29.747837	3
TCAACGC	1095	0.0	29.612001	4
CATGGGA	960	0.0	29.370598	4
GGGTACC	340	0.0	29.025063	7
GGTACCT	345	0.0	28.622944	8
TGGGAGT	265	0.0	28.373106	6
CTATTCC	170	4.0581654E-9	27.642918	4
TGGGTAC	365	0.0	27.037043	6