SRR6576435_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576435_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	308894
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	754	0.24409668041464064	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	446	0.14438610008611366	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	401	0.1298179958173354	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	401	0.1298179958173354	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	390	0.12625690366274517	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	354	0.11460242024772252	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	349	0.11298374199563603	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	348	0.11266000634521875	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	342	0.11071759244271498	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	334	0.10812770723937662	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	332	0.10748023593854202	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	331	0.10715650028812473	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	309	0.10003431597894424	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTAAGG	45	0.0010114126	41.789436	2
CTGTACG	45	0.0010138338	41.769142	4
GTACATG	1935	0.0	38.693607	1
ACATGGG	1915	0.0	38.524673	3
TACATGG	1975	0.0	38.08658	2
GTATCAA	910	0.0	37.775005	1
GTGTAAG	50	0.0016843028	37.671513	1
CCTAATG	50	0.001697771	37.610493	2
CATGGGT	425	0.0	36.486576	4
CATGGGG	835	0.0	35.45375	4
GGCATAT	55	0.0026887727	34.246826	1
ATGGGTA	235	0.0	33.992973	5
ATGGGGA	410	0.0	32.090927	5
CTTAAAC	75	3.2740063E-4	31.326857	3
AATAGAG	60	0.0041605216	31.326857	5
AACGCAG	1085	0.0	31.182493	6
ATCAACG	1150	0.0	30.237228	3
CATGGGA	905	0.0	29.596092	4
TCAACGC	1165	0.0	29.444555	4
CAACGCA	1150	0.0	29.420006	5