SRR6576435_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576435_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	308894
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	828	0.2680531185455205	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	500	0.16186782520864762	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	445	0.1440623644356964	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	421	0.13629270882568129	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	371	0.12010592630481655	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	369	0.11945845500398194	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	339	0.1097463854914631	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	331	0.10715650028812473	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	321	0.10391914378395177	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	311	0.10068178727977882	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	780	0.0	44.016296	1
GTACATG	1710	0.0	38.780037	1
TACATGG	1755	0.0	37.517696	2
ACATGGG	1815	0.0	36.501076	3
ATGGGTA	280	0.0	35.239075	5
AACGCAG	960	0.0	34.26021	6
GGGTACC	270	0.0	33.06382	7
CAACGCA	1015	0.0	32.866653	5
ATCAACG	1035	0.0	32.685516	3
GGTACCT	275	0.0	32.46266	8
TCAACGC	1050	0.0	31.771101	4
ATAAGCC	60	0.0041626273	31.323618	3
CATGGGG	870	0.0	29.703432	4
ACGCAGA	1125	0.0	29.235378	7
TGGGTAC	290	0.0	29.163372	6
CATGGGT	460	0.0	28.599827	4
CGCAGAG	1185	0.0	27.755106	8
CATGGGA	775	0.0	27.281862	4
TTATATA	105	7.371021E-5	26.874924	2
TCTTAGA	70	0.00879775	26.874922	2