SRR6576434_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576434_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	345106
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	835	0.24195464581896575	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	526	0.15241693856380356	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	439	0.12720729283176763	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	405	0.11735524737327083	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	402	0.11648594924457993	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	379	0.10982133025794973	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	376	0.10895203212925883	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	373	0.10808273400056793	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAAGAC	45	0.0010111025	41.793434	3
GTATCAA	825	0.0	41.68806	1
GTACATG	2000	0.0	37.690575	1
GCTATAT	50	0.0016803958	37.690575	1
GCGTGTA	50	0.0017008797	37.59774	9
ACATGGG	2055	0.0	37.06498	3
TACATGG	2045	0.0	37.016308	2
GGTACCT	365	0.0	34.765034	8
ATCAACG	1005	0.0	34.152096	3
AACGCAG	1050	0.0	33.57914	6
GGGTACC	350	0.0	33.569412	7
CAACGCA	1020	0.0	33.184093	5
ATGGGTA	355	0.0	33.106194	5
TCAACGC	1040	0.0	32.545937	4
CATGGGT	570	0.0	32.16528	4
CATGGGA	930	0.0	31.34053	4
GATAGCG	60	0.0041582077	31.33145	7
TATACTT	80	4.7676146E-4	29.381748	5
GTATAAT	65	0.006076418	28.992748	1
CATAATA	65	0.0061370367	28.933916	2