SRR6576424_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576424_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	152910
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	386	0.25243607350729186	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	224	0.14649140017003465	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	196	0.12817997514878032	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	195	0.12752599568373554	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	195	0.12752599568373554	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	178	0.11640834477797397	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	172	0.11248446798770519	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	170	0.1111765090576156	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	168	0.10986855012752599	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	161	0.1052906938722124	No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCG	153	0.10005885815185403	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACACGT	20	0.0021616805	70.48112	94
GCTAGAC	25	0.0052329316	56.384895	2
TAGTACA	35	2.933324E-4	53.699898	9
CATGGGG	355	0.0	43.67844	4
TCTAATA	45	0.0010125304	41.76659	2
GTACATG	880	0.0	39.512142	1
ACATGGG	870	0.0	39.42622	3
TACATGG	885	0.0	39.28891	2
TAGCGCG	50	0.0016996516	37.589928	4
GTATCAA	300	0.0	37.589928	1
ATGGGGC	120	4.1673047E-9	35.24056	5
GTGTTAG	55	0.002713243	34.17266	1
TCTAGCC	55	0.002713243	34.17266	3
TAACACA	55	0.002713243	34.17266	4
AGCGCGC	55	0.002713243	34.17266	5
ACATACT	55	0.002713243	34.17266	5
TGTAGCG	70	2.1796161E-4	33.562435	2
CTGGTAC	85	1.7480985E-5	33.167583	3
GCGCGTG	60	0.0041552563	31.324942	8
CGCGCGT	60	0.0041552563	31.324942	7