SRR6576421_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576421_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	226214
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	530	0.234291423165675	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	326	0.1441113282113397	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	304	0.13438602385351925	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	291	0.1286392530966253	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	259	0.11449335584888644	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	250	0.1105148222479599	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	242	0.10697834793602518	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	237	0.10476805149106597	No Hit
CCTCTAGGCGGTCACGGGCCTGGTTGCCCACTTCCTCCAGCCGCCCTCGG	231	0.10211569575711493	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	230	0.10167363646812311	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGATT	25	0.0052314964	56.397614	5
TAGGGTC	25	0.0052314964	56.397614	4
CATGGGT	350	0.0	44.312412	4
GTACATG	1610	0.0	43.308445	1
ATGGGTA	220	0.0	42.725468	5
ACATGGG	1635	0.0	42.255093	3
TGTATAC	45	0.0010124383	41.776012	3
TATACAG	45	0.0010124383	41.776012	5
TACATGG	1705	0.0	40.79593	2
TAAGCAA	105	5.082984E-8	35.808006	5
TTAAGCA	120	4.1763997E-9	35.248512	4
CATGGGA	720	0.0	33.29026	4
TATTAAG	100	1.4049983E-6	32.89861	2
GTATCAA	675	0.0	32.804306	1
CATGGGG	765	0.0	31.94636	4
GATATAA	75	3.2217585E-4	31.408377	1
GTTAATC	60	0.0041548447	31.33201	3
ATGGGAC	150	1.0604708E-9	31.332008	5
GGTACCT	260	0.0	30.72947	8
ATGGGAG	315	0.0	29.840004	5