SRR6576421_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576421_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	226214
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	532	0.23517554174365868	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	319	0.14101691318839682	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	318	0.140574853899405	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	299	0.13217572740856004	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	272	0.12024012660578037	No Hit
CCTCTAGGCGGTCACGGGCCTGGTTGCCCACTTCCTCCAGCCGCCCTCGG	262	0.11581953371586197	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	242	0.10697834793602518	No Hit
GGAGAAGGATACTCATTGATTCTCCTGGGCCACTGGGGTGATGATGGGGT	232	0.10255775504610677	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTACC	20	0.0021610712	70.497185	94
GTATCAA	755	0.0	42.951923	1
GTATATA	85	3.9381484E-7	38.704334	1
AACGCAG	910	0.0	35.635937	6
ATCAACG	930	0.0	35.374928	3
GTACATG	1525	0.0	35.133022	1
TCAACGC	930	0.0	34.86957	4
TACATGG	1530	0.0	34.71103	2
CAACGCA	945	0.0	34.31609	5
GGTTTAC	55	0.0027129506	34.18045	1
ATAACGC	70	2.1799929E-4	33.570087	3
ACATGGG	1560	0.0	33.440968	3
TGTACAT	60	0.0041547976	31.332079	5
CATGGGA	675	0.0	30.63581	4
TATCAAC	1085	0.0	30.32137	2
ACGCAGA	1030	0.0	30.115301	7
CATGGGT	255	0.0	29.489017	4
ATGGGAG	340	0.0	29.02825	5
TTTGGCC	65	0.0061450643	28.92192	3
GTCCGGC	65	0.0061450643	28.92192	94