SRR6576389_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576389_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	146566
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	390	0.26609172659416236	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	271	0.1848996356590205	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	241	0.16443104130562342	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	240	0.16374875482717685	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	238	0.1623841818702837	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	191	0.1303167173832949	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	190	0.12963443090484833	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	182	0.12417613907727577	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	169	0.11530641485747037	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	160	0.10916583655145122	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	159	0.10848355007300466	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	156	0.10643669063766495	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	148	0.10097839881009238	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATGAG	25	0.0052301106	56.3914	3
TTACACC	55	5.2652096E-5	42.720757	4
GTATCAA	585	0.0	39.45575	1
GTACATG	995	0.0	35.03311	1
TACATGG	1010	0.0	33.97671	2
AACGCAG	630	0.0	33.56631	6
ACATGGG	980	0.0	33.56631	3
CATGGGG	410	0.0	33.23884	4
CAACGCA	700	0.0	32.22366	5
ATCAACG	700	0.0	32.22366	3
TCAACGC	705	0.0	31.995121	4
ATAATAG	60	0.0041523506	31.328558	3
ATGGGGT	110	2.94872E-6	29.904531	5
CTAGTAC	80	4.7650415E-4	29.370522	3
TATACAG	80	4.7650415E-4	29.370522	5
CCTTGAA	65	0.0061312383	28.928537	2
TAAGAGT	65	0.006141475	28.918669	6
ACGCAGA	765	0.0	27.642843	7
CTGTGCG	70	0.008788574	26.871384	9
GTGCACT	70	0.008817896	26.853048	6